research interests  
  some talks  


  Journal articles

  • Bui Quoc Chinh, Sophia Katrenko, and Peter Sloot. A Hybrid Approach to Extract Protein-Protein Interactions. Bioinformatics vol. 27(2), pp. 259-265, (impact factor: 4.926), 2011.
  • Sophia Katrenko, Pieter Adriaans, and Maarten van Someren. Using Local Alignments for Relation Recognition. In Journal of Artificial Intelligence Research (JAIR), vol. 38, pp. 1-48, (impact factor: 1.981), 2010.
  • M. Roos, M. S. Marshall, A. P. Gibson, M. Schuemie, E. Meij, S. Katrenko, W.R. van Hage, K. Krommydas, and P.W. Adriaans. Structuring and Extracting Knowledge for the Support of Hypothesis Generation in Molecular Biology. BMC Bioinformatics, 10(Supplement 10), 2009.
  • Larry Smith et al. Overview of BioCreative II Gene Mention Recognition. In Genome Biology, 9(Suppl 2), 2008.


  • S. Katrenko. A Closer Look at Learning Relations from Text. PhD thesis, University of Amsterdam. ISBN 978-90-9024518-8. 2009.

  Edited volumes

  • Maarten van Someren, Sophia Katrenko, and Pieter Adriaans (eds.). Proceedings of the Belgian-Dutch Conference on Machine Learning. Amsterdam, May 2007.
  • Janneke Huitink and Sophia Katrenko (eds.). Proceedings of the Eleventh ESSLLI Student Session. University of Malaga, Spain. August 2006.

  Refereed conference and workshop proceedings

Click here to visit the website of the UvA Valid HTML 4.01 Transitional